CDS

Accession Number TCMCG006C93738
gbkey CDS
Protein Id XP_013676336.1
Location join(29233452..29233602,29233702..29233751,29234201..29234408,29234486..29234611,29234781..29234879,29235230..29235906,29235999..29236247,29236329..29236457,29236551..29236619,29236695..29236805,29237033..29237140,29237219..29237329,29237414..29237500,29240424..29240525,29240606..29240713,29240785..29240868,29240961..29241023,29241661..29241765)
Gene LOC106381021
GeneID 106381021
Organism Brassica napus

Protein

Length 878aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013820882.2
Definition synaptonemal complex protein 1-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Synaptonemal complex protein 1-like isoform X1
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K19533        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0000802        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAGAAGATAGGGTTTCCGGCGATGAAGAGCTTGGATCAGATTCGATCGATGGCGGCTGGATCCGCGAAGAATCTATCCTCCTTCTCCTCGCGTCAACCTCACGATTCCGTCTCTTCCGGAAACTTCTCGAATCTTAAGTTCACTGCAGAGAAACTGGTGAAGGAACAGGCTTCTATGAAACCCGATCTCGAATTGGCGAACTCTAAGCTGAAAAAATCCAAGGATCATATACTTGCTTTAGAGGAAAAGCTGCAGAGCGCTTTCAACGAGAATGCTAAGCTCAGGGTGATGCAAAAGGAGGATGAAAAGCTTTGGACAGGGATGGAGTCCAAGTTTTCTTCAACCAAGACTCTCTGTGATCAACTTACTGAGACTCTGCAGCACTTGGCTTCTCAGGTTCAAGAAGCTGAGAAGGATAAGGAGTTCTTTGAGTCCAAATTCTCCACTAGTGCGGAAACAATTGACTCTTTAAAGCAGCAAATGCAAGATCTCTCTGTGAGACTGAGTTCCGCTGAAGAAAACATCAAAAGCCGTGAGAAGGAACTAGAGGAGCTACGATTCGAGAAAGAAGAGAAAGAAAACTCTTATCTTAGTGAACAGTGTAGAACTGCCAGTCTCTTAAAGGTGAAAGATGCTACGATAGCAAATTCTGAAGCAGCTATAGCTGAAGCAAAAGTCAACATTGAGAATATAAACTTCCAAATTGAGAAGCTGCGGCTGGAGTTAACCTCAAAAGAAGATGAGGCCAAATACCTTGTTGGCGTCAAGGAGAATTTGGAACAAGAGAAGATGGATATTCAGCTGAGTGCGGATAATCTATCTGAGAAACTGATTAACTCAGGCCAGGAGGTCAAGAAGCTCGAGGGCTTTATCCACTCTTTGGCAACTGAGTTGGGTGAATTGGACAAAAAGAACTTGGTGTTCATGAAAAACTTTGATAAGCTAAATGCTTTATATGGCACTCACCTTATGTTGCTCCAAAAGGATAGAGATCTTGCCTCTGATCATGCTCAAACGTTATTCAATCAACTCCAAGGAGAGTTATTGAGTGTAACCTTCCAGAAAGAAGCTCTGCAATCATCAGGTAATGAGTTATATGAACAAAGAGAGGAACTGAAGAAAGCTAAAGAGTCATTGGTCTCCCAACTTGCCGAGGAACGCTGCTCCGCAAGGCAGACAATTGAAAAACTAGAGTCTGAAGCAAAATGTCTAGTTTCAACAAATGATGAGTCAGAAGCAGTGATTGCAAAGCTGAAAGAGGAATTCGAAGCATTGTCTGAAAATCTGAGGGCCTCAGAGAATAAGACGCAAGAATTGATGCTAAAGCTTTCATCATCAGAGCTTGAAAGTAAAGAGAATTATGAGAAGATTCAGGCTGATGCACAGAGAAAGGCTGAAGAAATGGAAATTTTGCAGAAAGAGAGCCAGAGCAATCAGCTGCGTGTCGATTCATTGTCAGAAGAGGTGAACCAGCTCCAAAGCGTTATTGAAGAGAAAGAACTTCTTATCCATCAATGCAAGGAAAATGAGAAGAAGCGGGACCAGAAAACCACAGAGGACAAGGAGCTACTAGCAGCTGTTGAAACTAAGCTTGTAGAAGCGAAGAAGCAATATGCTCTTATGCTGGAAAATAAACAGTTGGAATTATCAAGGCACTTGAAGGAGTTATCTCAGAGGAATGACCAGGCCATTAATGAAATCCGGAGGAAATATGATGAGGAGAAACAGGAGATTATTAATGGAGAAAAGGAAAAGGTTGAGAAGGTTATCAAAGAATTATCCACTAAATATGACAAAGAACTTTCAGATTGTAAAGCCGAATCAAAGCAGCAATTGCTAGCCATTCAAGAGGATCATGCTTCTCTGACACTCTCAATTCAGAAGGAACACGAAACTAGGGAGTTCAATCTCAAAGCTAAGCACGATGAGGAGCTGAGACAAGCTCAGATTCAGGCTGAAACTGAATTAACAGAGAGGATAACAACACTCAGGAACGAGCATGATGTTCAGTTGAAAGCATTCAAGTGTCAGTATGAAGATGAATGCAAGAAGTTGCAAGATGAATTAGATCTTCAAAGATCAAAAGAAGAGAGGCAAAGAGCTTTGTTGCAAATGCAATGGAGGGTTATGAGTGACAAAGATCCTGAAGAGCAAGAACTGAACTCTAGGAAGGAATACTCTGTTTCATCTGTCAAAGTGAGAGCTCCTCGTCCTGCTCGTCCTGCTAGCAAGAGAAGCAAGCATGCAACAGTGATGCAGGATGGCGACGAACAGGATTCACCTTTTGTAAAGGCAGCAGAAACACCTGTGACAAAGATGTCGAAAAAAGTTGAAAATGCAAATACGAGAAGCTTAATGAGCAGTCAAAAGCATCATAGCAAGGTGGCTCGTCGTGAATATGAAACTGAAACGAACGATGGGAGGACCACAAAACGAATGAAAACAGGAGGCACAGTAATGTTTGAGGAGCCAAGGAGGAGATCTACACGGATTACACCCAAAGCCAAGACCCCCAGAAGTATCGCTAAGGTGGCAGCCATAAGGAGTCATCCACCACAGTCTGCAAACCTAGGAGATCTTTTTTCAGAAGGCTCCCTCAATCCTTATGCTGATGATCCTTATGCGTTTGACTGA
Protein:  
MQKIGFPAMKSLDQIRSMAAGSAKNLSSFSSRQPHDSVSSGNFSNLKFTAEKLVKEQASMKPDLELANSKLKKSKDHILALEEKLQSAFNENAKLRVMQKEDEKLWTGMESKFSSTKTLCDQLTETLQHLASQVQEAEKDKEFFESKFSTSAETIDSLKQQMQDLSVRLSSAEENIKSREKELEELRFEKEEKENSYLSEQCRTASLLKVKDATIANSEAAIAEAKVNIENINFQIEKLRLELTSKEDEAKYLVGVKENLEQEKMDIQLSADNLSEKLINSGQEVKKLEGFIHSLATELGELDKKNLVFMKNFDKLNALYGTHLMLLQKDRDLASDHAQTLFNQLQGELLSVTFQKEALQSSGNELYEQREELKKAKESLVSQLAEERCSARQTIEKLESEAKCLVSTNDESEAVIAKLKEEFEALSENLRASENKTQELMLKLSSSELESKENYEKIQADAQRKAEEMEILQKESQSNQLRVDSLSEEVNQLQSVIEEKELLIHQCKENEKKRDQKTTEDKELLAAVETKLVEAKKQYALMLENKQLELSRHLKELSQRNDQAINEIRRKYDEEKQEIINGEKEKVEKVIKELSTKYDKELSDCKAESKQQLLAIQEDHASLTLSIQKEHETREFNLKAKHDEELRQAQIQAETELTERITTLRNEHDVQLKAFKCQYEDECKKLQDELDLQRSKEERQRALLQMQWRVMSDKDPEEQELNSRKEYSVSSVKVRAPRPARPASKRSKHATVMQDGDEQDSPFVKAAETPVTKMSKKVENANTRSLMSSQKHHSKVARREYETETNDGRTTKRMKTGGTVMFEEPRRRSTRITPKAKTPRSIAKVAAIRSHPPQSANLGDLFSEGSLNPYADDPYAFD